{ "_id": "6a1f2f5bb401979e73427071", "Package": "FAPA", "Type": "Package", "Title": "Factor Analytic Profile Analysis of Ipsatized Data", "Version": "0.1.1", "Date": "2026-04-08", "Authors@R": "person(\"Se-Kang\", \"Kim\",\nemail = \"se-kang.kim@bcm.edu\",\nrole = c(\"aut\", \"cre\"))", "Description": "Implements Factor Analytic Profile Analysis of Ipsatized\nData ('FAPA'), a metric inferential framework for pattern\ndetection and person-level reconstruction in multivariate\nprofile data. After row-centering (ipsatization) to remove\nprofile elevation, 'FAPA' applies singular value decomposition\n('SVD') to recover shared core profiles and individual pattern\nweights. Dimensionality is determined by a variance-matched\nHorn's parallel analysis. A three-stage bootstrap verification\nframework assesses (1) dimensionality via parallel analysis,\n(2) subspace stability via Procrustes principal angles, and (3)\nprofile replicability via Tucker's congruence coefficients. BCa\nbootstrap confidence intervals for core-profile coordinates are\ncomputed via the canonical 'boot' package implementation of\nDavison and Hinkley (1997) .", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "LazyData": "true", "VignetteBuilder": "knitr", "RoxygenNote": "7.3.3", "Config/testthat/edition": "3", "URL": "https://github.com/sekangakim/FAPA", "BugReports": "https://github.com/sekangakim/FAPA/issues", "Repository": "https://sekangakim.r-universe.dev", "Date/Publication": "2026-04-08 16:17:25 UTC", "RemoteUrl": "https://github.com/sekangakim/fapa", "RemoteRef": "HEAD", "RemoteSha": "dfc1d1391ba8316e828be1d7a3b16a8133c1ef65", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-15 09:13:01 UTC", "User": "root" }, "Author": "Se-Kang Kim [aut, cre]", "Maintainer": "Se-Kang Kim ", "MD5sum": "5623c5a8152989a8ab5598970dc4d7a7", "_user": "sekangakim", "_type": "src", "_file": "FAPA_0.1.1.tar.gz", "_fileid": "359d12108aef88c796cd6f800fb3691b9f9f73b63f52c94fd25831973a990aba", "_filesize": 229866, "_sha256": "359d12108aef88c796cd6f800fb3691b9f9f73b63f52c94fd25831973a990aba", "_created": "2026-05-15T09:13:01.000Z", "_published": "2026-06-02T19:30:35.277Z", "_distro": "noble", "_jobs": [ { "job": 79154984005, "time": 113, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7013823590" }, { "job": 79154984399, "time": 96, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7013819297" }, { "job": 79154984339, "time": 181, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7013832131" }, { "job": 79154983776, "time": 122, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7013820404" }, { "job": 79154983513, "time": 147, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7013791375" }, { "job": 79154983248, "time": 100, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7367801112" }, { "job": 79154984135, "time": 84, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7013815969" }, { "job": 79154984383, "time": 76, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7013813583" }, { "job": 79154983934, "time": 70, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7013811930" } ], "_buildurl": "https://github.com/r-universe/sekangakim/actions/runs/25909852345", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/sekangakim/fapa", "_commit": { "id": "dfc1d1391ba8316e828be1d7a3b16a8133c1ef65", "author": "Se-Kang Kim ", "committer": "Se-Kang Kim ", "message": "Fix load_and_ipsatize example: self-contained tempfile; update DESCRIPTION v0.1.1\n", "time": 1775665045 }, "_maintainer": { "name": "Se-Kang Kim", "email": "se-kang.kim@bcm.edu" }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "boot", "role": "Imports" }, { "package": "graphics", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "utils", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "sekangakim", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2026-12", "n": 3 }, { "week": "2026-14", "n": 2 }, { "week": "2026-15", "n": 1 } ], "_tags": [], "_stars": 0, "_userbio": { "uuid": 258041971, "type": "user", "name": "sekangakim" }, "_downloads": { "count": 463, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/FAPA" }, "_devurl": "https://github.com/sekangakim/fapa", "_searchresults": 0, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/FAPA.html", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_homeurl": "https://github.com/sekangakim/fapa", "_realowner": "sekangakim", "_cranurl": true, "_releases": [ { "version": "0.1.1", "date": "2026-04-15" } ], "_exports": [ "fapa_bca", "fapa_core", "fapa_pa", "fapa_person", "fapa_procrustes", "fapa_tucker", "load_and_ipsatize", "plot_fapa_core", "plot_pa_scree", "plot_person_match", "plot_principal_angles", "plot_tucker_cc", "print_pa", "print_procrustes", "print_tucker", "write_fapa_results", "write_verification" ], "_datasets": [ { "name": "fapa_simdata", "title": "Synthetic EDI-2 profile data for FAPA examples", "object": "fapa_simdata", "class": [ "data.frame" ], "fields": [], "rows": 0, "table": true, "tojson": true } ], "_help": [ { "page": "FAPA-package", "title": "FAPA: Factor Analytic Profile Analysis of Ipsatized Data", "topics": [ "FAPA-package", "FAPA" ] }, { "page": "fapa_bca", "title": "BCa bootstrap confidence intervals for FAPA core profiles", "topics": [ "fapa_bca" ] }, { "page": "fapa_core", "title": "Core FAPA estimation via SVD", "topics": [ "fapa_core" ] }, { "page": "fapa_pa", "title": "Stage 1: Horn's Parallel Analysis (variance-matched bootstrap)", "topics": [ "fapa_pa" ] }, { "page": "fapa_person", "title": "Person-level reconstruction and pattern weights", "topics": [ "fapa_person" ] }, { "page": "fapa_procrustes", "title": "Stage 2: Procrustes stability via principal angles", "topics": [ "fapa_procrustes" ] }, { "page": "fapa_simdata", "title": "Synthetic EDI-2 profile data for FAPA examples", "topics": [ "fapa_simdata" ] }, { "page": "fapa_tucker", "title": "Stage 3: Profile replicability via Tucker's congruence coefficients", "topics": [ "fapa_tucker" ] }, { "page": "load_and_ipsatize", "title": "Load a CSV and ipsatize (row-centre) it", "topics": [ "load_and_ipsatize" ] }, { "page": "plot_fapa_core", "title": "Plot a core profile with BCa confidence intervals", "topics": [ "plot_fapa_core" ] }, { "page": "plot_pa_scree", "title": "Scree plot for Horn's parallel analysis", "topics": [ "plot_pa_scree" ] }, { "page": "plot_person_match", "title": "Overlay a person's ipsatized profile against FAPA core profiles", "topics": [ "plot_person_match" ] }, { "page": "plot_principal_angles", "title": "Distribution plots for Stage 2 principal angles", "topics": [ "plot_principal_angles" ] }, { "page": "plot_tucker_cc", "title": "Distribution plots for Stage 3 Tucker congruence coefficients", "topics": [ "plot_tucker_cc" ] }, { "page": "print_pa", "title": "Print a summary of Stage 1 parallel analysis results", "topics": [ "print_pa" ] }, { "page": "print_procrustes", "title": "Print a summary of Stage 2 principal-angle results", "topics": [ "print_procrustes" ] }, { "page": "print_tucker", "title": "Print a summary of Stage 3 Tucker CC results", "topics": [ "print_tucker" ] }, { "page": "write_fapa_results", "title": "Write core-profile BCa CI tables to CSV", "topics": [ "write_fapa_results" ] }, { "page": "write_verification", "title": "Write three-stage verification results to CSV", "topics": [ "write_verification" ] } ], "_readme": "https://github.com/sekangakim/fapa/raw/HEAD/README.md", "_rundeps": [ "boot" ], "_vignettes": [ { "source": "fapa_example.Rmd", "filename": "fapa_example.html", "title": "FAPA: A complete worked example", "author": "Se-Kang Kim", "engine": "knitr::rmarkdown", "headings": [ "Overview", "1. User settings", "2. Load data and ipsatize", "3. Stage 1 — Horn's Parallel Analysis", "4. Core FAPA solution", "5. Stage 2 — Procrustes / principal angles", "6. Stage 3 — Tucker's congruence coefficients", "7. BCa confidence intervals for core profiles", "8. Person-level reconstruction", "9. Sanity check and output", "Session info" ], "created": "2026-03-20 21:54:16", "modified": "2026-03-20 21:54:16", "commits": 1 } ], "_score": 4.176091259055681, "_indexed": true, "_nocasepkg": "fapa", "_universes": [ "sekangakim" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.1", "date": "2026-05-15T09:14:55.000Z", "distro": "noble", "commit": "dfc1d1391ba8316e828be1d7a3b16a8133c1ef65", "fileid": "05600e8afac2873856428dd91d6b99fb0763f6d421efeb01ad03d981377f4209", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/sekangakim/actions/runs/25909852345" }, { "r": "4.6.0", "os": "linux", "version": "0.1.1", "date": "2026-05-15T09:14:41.000Z", "distro": "noble", "commit": "dfc1d1391ba8316e828be1d7a3b16a8133c1ef65", "fileid": "d1a0efdb85a59865bc0bdf66917e0f40d6dddc2a3d45503e23d958247b207e66", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/sekangakim/actions/runs/25909852345" }, { "r": "4.5.3", "os": "mac", "version": "0.1.1", "date": "2026-05-15T09:15:26.000Z", "commit": "dfc1d1391ba8316e828be1d7a3b16a8133c1ef65", "fileid": "7fa81b1f39c656aabe44631d5e7a44bb09ead6406b7adb16d7552ae68be912d2", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/sekangakim/actions/runs/25909852345" }, { "r": "4.6.0", "os": "mac", "version": "0.1.1", "date": "2026-05-15T09:14:48.000Z", "commit": "dfc1d1391ba8316e828be1d7a3b16a8133c1ef65", "fileid": "50c30890d4e92356caf0f84083a1c408ed936b73927e06dde699ec46d7d7ddfd", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/sekangakim/actions/runs/25909852345" }, { "r": "4.7.0", "os": "win", "version": "0.1.1", "date": "2026-05-15T09:14:21.000Z", "commit": "dfc1d1391ba8316e828be1d7a3b16a8133c1ef65", "fileid": "a599dbebb1a2ff7eafd00abc7cacf339e4d3343c9459b8a4caacbae2bd5c7c38", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/sekangakim/actions/runs/25909852345" }, { "r": "4.5.3", "os": "win", "version": "0.1.1", "date": "2026-05-15T09:14:13.000Z", "commit": "dfc1d1391ba8316e828be1d7a3b16a8133c1ef65", "fileid": "51ad1c76b0ce563dfaa5b52a68636425f7dbf8df89e13fb27bfc892f1a507600", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/sekangakim/actions/runs/25909852345" }, { "r": "4.6.0", "os": "win", "version": "0.1.1", "date": "2026-05-15T09:14:07.000Z", "commit": "dfc1d1391ba8316e828be1d7a3b16a8133c1ef65", "fileid": "2bcea98547502657e9d6a8e90636cdecee79642748c72c48b746e457fe76aa6f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/sekangakim/actions/runs/25909852345" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.1", "date": "2026-06-02T19:30:13.000Z", "commit": "dfc1d1391ba8316e828be1d7a3b16a8133c1ef65", "fileid": "3034d2af6a5154a017e03f9b7e4f9e8e18ad2c6d80acaaed238d8b17b39e4fd8", "status": "success", "buildurl": "https://github.com/r-universe/sekangakim/actions/runs/25909852345" } ] }